PEARL Paleoecological Environmental Assessment and Research Laboratory

PEARL

P

aleoecological

E

nvironmental

A

ssessment and

R

esearch

L

aboratory
Queen's University

Basic Laboratory and Field Methods Used at PEARL

Diatom Prep
Diatom Taxonomy
Microscopy
Invertebrates
Facilities
Glew Coring
Core Extruding
Line Attachment
Water Sampling
Safety

A valuable source of paleolimnological methods is the DPER - Book Series Volumes 1-4  

Peat and other types of coring video

Line Attachment Procedures for Glew Gravity Corers


R Scripts used at PEARL

The 'jezioro' package for R (by Adam Jeziodski)

The 'jezioro' (polish for 'lake') R package is a collection of functions and datasets intended to simplify some of the work performed at PEARL. The current version (0.20) contains ten functions that can help perform some of the common analyses done in our lab. Including things like:
- determining the number of individuals represented in counts of cladoceran remains
- inferring VWHO from sedimentary chironomid assemblages

The package also contains master copies of some commonly used datasets.

vrs PigmentE v0 script for chl-a and cyanobacteria VRS inference (by Evan Jones)

A simple to use and efficient R script Sedimentry Chlorophyll a for rapid (nearly) single step processing of .xls files produced by Vision software (VNIRS scan output).
Click here to copy and paste vrsPigment Ev0.
Click here to download the Favot et al. vrs Cyanobacteria Calibration Data (required for vrsPigmentE).



Note on updated VRS-chlorophyll a inference equation: For an explaination of the update see: CHLa_updated_formula_explaination


For INTERNAL METHODS and DOCUMENTS only available to PEARL students and researchers: Click Here [Password required]

 

Other Resources


Queen's University